RNA Folding Methods and Protocols 1st Edition by Ivo Hofacker ISBN 978-1493960583 149396058X
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Product details:
ISBN 10:149396058X
ISBN 13: 978-1493960583
Author: L. Hofacker
RNA Folding: Methods and Protocols (1st Edition), edited by Ivo L. Hofacker, is a comprehensive volume in the Methods in Molecular Biology series that delves into the computational and experimental approaches to understanding RNA folding. This book serves as a valuable resource for researchers aiming to explore the structural dynamics of RNA molecules.
Table of contents:
1 Predicting RNA Structure: Advances and Limitations Ivo L. Hofacker and Ronny Lorenz
2 Cis-Acting 5′ Hammerhead Ribozyme Optimization for In Vitro Transcription of Highly Structured RNAs. Mélanie Meyer and Benoît Masquida
3 RNA Structural Analysis by Enzymatic Digestion Elisa Biondi and Donald H. Burke
4 The Mutate-and-Map Protocol for Inferring Base Pairs in Structured RNA…
Pablo Cordero, Wipapat Kladwang, Christopher C. Van Lang, and Rhiju Das
5 Mapping RNA Structure In Vitro Using Nucleobase-Specific Probes. Nora Sachsenmaier, Stefan Handl, Franka Debeljak, and Christina Waldsich
6 Massively Parallel RNA Chemical Mapping with a Reduced Bias MAP-Seq Protocol. Matthew G. Seetin, Wipapat Kladwang, John P. Bida, and Rhiju Das
7 Probing RNA Folding by Hydroxyl Radical Footprinting Maria Costa and Dario Monachello
8 Monitoring Global Structural Changes and Specific Metal-Ion-Binding Sites in RNA by In-line Probing and Tb(III) Cleavage
Pallavi K. Choudhary, Sofia Gallo, and Roland K.O. Sigel
9 Chemical Probing of RNA in Living Cells. Michael Wildauer, Georgeta Zemora, Andreas Liebeg, Verena Heisig, and Christina Waldsich
10 A Chemogenetic Approach to Study the Structural Basis of Protein-Facilitated RNA Folding. Olga Fedorova
11 Applying UV Crosslinking to Study RNA-Protein Interactions in Multicomponent Ribonucleoprotein Complexes Andrey S. Krasilnikov
12 The Kinetics of Ribozyme Cleavage: A Tool to Analyze RNA Folding as a Function of Catalysis. Nora Zingler
13 RNA Catalytic Activity as a Probe of Chaperone-Mediated RNA Folding
Brant Gracia and Rick Russell
14 Evaluation of RNA Chaperone Activity In Vivo and In Vitro Using Misfolded Group I Ribozymes
Katharina Semrad
15 RNA Conformational Changes Analyzed by Comparative
Gel Electrophoresis.
Sébastien H. Eschbach and Daniel A. Lafontaine
16 Detecting RNA Tertiary Folding by Sedimentation Velocity Analytical Ultracentrifugation
Somdeb Partners
17 RNA Folding Dynamics Using Laser-Assisted Single-Molecule Refolding
Bishnu Paudel and David Rueda
18 RNA Refolding Studied by Light-Coupled NMR Spectroscopy.. Harald Schwalbe and Boris Fürtig
19 Exploring RNA Oligomerization and Ligand Binding by Fluorescence Correlation Spectroscopy and Small Angle X-Ray Scattering
Eileen Magbanua, Petr V. Konarev, Dmitry I. Svergun, and Ulrich Hahn
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